Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015832792.1_cds_XP_016505019.1_18397
CDS Infomation

[gene=LOC107822945] [db_xref=GeneID:107822945] [protein=uncharacterized protein LOC107822945 isoform X2] [protein_id=XP_016505019.1] [location=complement(join(14328..15005,16631..16843,17006..17539,17743..18189,18307..18374,18454..18598,18808..18855))] [gbkey=CDS]
Sequence

ATGGAAATATATACTTTTCCTCAGCAAGGACATGTGGATGCTTATATGATTCAGGGTACT
GAGGCAAACCTGCAGATCACCAGTCCGCTGCTTCAAAACCTTGAAGCTATGTATAATGAA
GGAGCCCCTGAATTTGCTGTTGATCAGGGATTATATTATCCATCTGCCACTAGTTATGGT
TATCTCTGTACAGAATCTTCCGGTGATTGGGATGGCCACCAAAGATTTTTTGGTCTGGAT
GGTCAAGATATTCAGTATATGGATGCTCAAACTGAAAGTTTCCCCTATGTATATTATACA
CCTAACTATGGATGTGCACAGTCTCCATATAACCCATACAACCCTTACATTCCTGGTGCT
GTTGTAGGAGTTGATGCTCCATGTGCAGGGCCACAACATTACTACACAATCCCCTCTTAT
GAAAACCCTGGTTTTCCCGTGGTGGTTCCATCTACATCTGGTATTATTGCGAATGCTGCA
GAGCCAATAATGGATAGTGTTATATCTACTACTAACAGAGCTGATGGTCTTCGTCTTAAA
CGTAATTTATCTCCAACATCTCCAATGTTTACCCCAATTCCATTAGGGCCAGCGTCAGGT
CATAAAAATGCATCAAACAGGGGGTCTGAAAGTGCAAAGCTTAATGCTGGATCTAGTAAA
CAGCCTGCATCGTATGGTTTTTCCAGTCCATCCTCTCAAGTACACCCGGGTAAAGTTGCT
CAAGCTATGGGAAGCGTTATCCATGGGAAGGCTTTGTCAAATCCTGGCCAACTGAGAGCT
CCTGTTCCCTCCGAAAATGACTTGTCTAATATCAGATCAGGTGCTCATGAGCGAGCTAAT
ACAGATAAAGCCAGGCCAAAGTTTCTAAATGGAATAGCCCCAAATGGTGGGAAAGTTAGT
CCTGATACATTGACCGAACAGAATCGAGGACCTAGAAATGAAAAAACGAAAAAGCAATTG
GTTGTGAAGGCCTACACTACAAGAGCAGGAAATGTTGATGCGCAGGGGAATATTGTTATT
CATGCTGATGAGTATAATAGAGGTGATTTTCTGATGGATTTTGTGAACGCGAAGTTTTTT
GTAATCAAATCATATAGTGAGGATGATGTGCACAAGAGTATAAAGTACAATGTTTGGTCA
TCCACCCCTAATGGTAACAAAAAGCTGTATGGTGCTTATGAAGACGCTCAGAGAATTGCT
GCTAGAGATCCAAGAGGCTGCCCAATATTCCTATTTTTCTCGGTTAATGCAAGTGGCCAG
TTTTGTGGTGTTGCTGAAATGACTGGTCCTGTAGACTTCTATAAGGACATGGATTTCTGG
CAGCAAGATAAGTGGAGTGGTAGCTTCCCTGTCAAGTGGCACTATATAAAGGATGTCCCA
AACCCTAACTTTAGGCATATTATATTAGAGAACAATGAGAACAAGCCAGTAACTAACAGC
AGAGACACACAAGAGATACGCTACAAGAAAGGCATTGAGATGTTGAAAGTATTCAAGGAT
TATGCGTCAAGGACATCATTACTAGATGACTTCATGTATTACGAAAATAGACAGAAACTC
TTGCAAGAAGAGAAAGCCAAGCTGCTAATCAGGAGCTATGAAAGTCCATTTCTTGTGCCT
GTATTAGATCCTCCTCGCAAGCTAAATTCCGTTTTTGGTTTACCTTCCAATGAAGGTGAG
AAGATTTCGAAGCTTAGTGAACACCAAGTGGCTGTTCCTGCAGTGCTGGATTCTGCAAAT
GCTAAAGCCAACAAAGATAATGCAAATGATGGTGACAAAATGACCGTTCCTGCAGTGCTG
GATTCTGCAAATGCTAAAGCCAACAAAGAAAATCCAAGTGACGGTGACAAACTGGAGGCT
GAAGGTGGTCCACACAGTGAGAGTGCCCTGAAGATTGGTTCACTAACTATTAACCCTAAA
AAGTCGAAATCGCAGCCCCTGGATGTACATAGTACTGGTAACACAATGGCAAGCACCCAG
TCAGTTGATGTTGTCACTGTGGGATCTATGCCTGTTAAAGTTAATGGACAGGCCGAGTCT
TCTGGTTTCCTAACGATTGGAACAATTCCGCTTGATCCTAGAGCTTTCCAGCGCGATGAG
GCCAGTCGGTCTGGAAAAAATGTTCCTAAGTGA

Peptide Sequence

PEP ID

XP_016505019.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107822945 isoform X2 [Nicotiana tabacum]
Sequence

MEIYTFPQQGHVDAYMIQGTEANLQITSPLLQNLEAMYNEGAPEFAVDQGLYYPSATSYG
YLCTESSGDWDGHQRFFGLDGQDIQYMDAQTESFPYVYYTPNYGCAQSPYNPYNPYIPGA
VVGVDAPCAGPQHYYTIPSYENPGFPVVVPSTSGIIANAAEPIMDSVISTTNRADGLRLK
RNLSPTSPMFTPIPLGPASGHKNASNRGSESAKLNAGSSKQPASYGFSSPSSQVHPGKVA
QAMGSVIHGKALSNPGQLRAPVPSENDLSNIRSGAHERANTDKARPKFLNGIAPNGGKVS
PDTLTEQNRGPRNEKTKKQLVVKAYTTRAGNVDAQGNIVIHADEYNRGDFLMDFVNAKFF
VIKSYSEDDVHKSIKYNVWSSTPNGNKKLYGAYEDAQRIAARDPRGCPIFLFFSVNASGQ
FCGVAEMTGPVDFYKDMDFWQQDKWSGSFPVKWHYIKDVPNPNFRHIILENNENKPVTNS
RDTQEIRYKKGIEMLKVFKDYASRTSLLDDFMYYENRQKLLQEEKAKLLIRSYESPFLVP
VLDPPRKLNSVFGLPSNEGEKISKLSEHQVAVPAVLDSANAKANKDNANDGDKMTVPAVL
DSANAKANKENPSDGDKLEAEGGPHSESALKIGSLTINPKKSKSQPLDVHSTGNTMASTQ
SVDVVTVGSMPVKVNGQAESSGFLTIGTIPLDPRAFQRDEASRSGKNVPK

Transcript Sequence

Gene sequence data has not been registered.